The INCF Digital Atlasing Program Report on Digital Atlasing Standards in the Rodent Brain
نویسنده
چکیده
منابع مشابه
Cyberinfrastructure for the digital brain: spatial standards for integrating rodent brain atlases
Biomedical research entails capture and analysis of massive data volumes and new discoveries arise from data-integration and mining. This is only possible if data can be mapped onto a common framework such as the genome for genomic data. In neuroscience, the framework is intrinsically spatial and based on a number of paper atlases. This cannot meet today's data-intensive analysis and integratio...
متن کاملWaxholm Space atlas of the Sprague Dawley rat brain
Three-dimensional digital brain atlases represent an important new generation of neuroinformatics tools for understanding complex brain anatomy, assigning location to experimental data, and planning of experiments. We have acquired a microscopic resolution isotropic MRI and DTI atlasing template for the Sprague Dawley rat brain with 39 μm isotropic voxels for the MRI volume and 78 μm isotropic ...
متن کاملIn vivo tracing of major rat brain pathways using manganese-enhanced magnetic resonance imaging and three-dimensional digital atlasing.
The magnetic resonance imaging (MRI)-detectable T1 contrast agent manganese (Mn2+) has recently been introduced as a neural tracer in rodents, birds, and monkeys. We have tested to what extent this in vivo method is useful for three-dimensional (3-D) survey of connectivity patterns in the rat somatosensory system. A commonly available 3 T human clinical MRI scanner was used to trace neural path...
متن کاملMulti-modal ultra-high resolution structural 7-Tesla MRI data repository
Structural brain data is key for the understanding of brain function and networks, i.e., connectomics. Here we present data sets available from the 'atlasing of the basal ganglia (ATAG)' project, which provides ultra-high resolution 7 Tesla (T) magnetic resonance imaging (MRI) scans from young, middle-aged, and elderly participants. The ATAG data set includes whole-brain and reduced field-of-vi...
متن کاملارزیابی کتابخانه دیجیتال دانشگاه علوم پزشکی تهران با استانداردهای ساختار کتابخانه دیجیتالی دانشگاهی
Introduction: Spite of many studies conducted on digital libraries, there are a few studies on the evaluation of this type of library. The present study was an attempt to determine similarities and differences between Tehran University of Medical Sciences Digital Library against the Structural Standards of an academic digital library. Methods: This was an observational study in which the dat...
متن کامل